CTGACAACAT AGAGAGAACC TATCTCCAAA ACTTTTTTTT TTTAAATTGG TTTGTGTGTG CCATAGCATA CACATGGAAG CCATAGGACA ACTTTTGGGA ACTGTTTTTC TCTCTGCTTT GTTGAGACAG GGTTTTTCTG TCTCTGCCTC TCTTTGTACT GTAGGCTAGC TGGGCTGTGA ACTTCAAGCT GATCTCTTTG C TTTTGTCTTT CTTCTCACAG TAGGGTGTTG GATTACAGAT TGGAGCCTAG GCTGCACCCA GCTTTTTGTT GGTTCTGGGG ATCAGATTTA GATGGCCAAA CTAGTGAGGC AAGTGCTGTA CACCTGCAGA GTCCAGATAT ACAATTTTTT TTTAAAAAAA TTACATTTAT TTATTCTTTT CTTCTTAGTA TTGCCCTGGC C = C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss321230242 | CHEV_4_101167713 | CHEVERUD | SCREENING_POP | f | SNP | C | C |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs251473694 | SNP | C | C |
Location: Chr4:101352305 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi14501 | CpG island 14501 | 1027 bp proximal | ||||||
Dnajc6 | DnaJ heat shock protein family (Hsp40) member C6 | 1523 bp upstream | ||||||
Rr596165 | regulatory region 596165 | 1213 bp distal | ||||||
Rr596166 | regulatory region 596166 | 1050 bp proximal | ||||||
Rr596167 | regulatory region 596167 | 1551 bp proximal | ||||||
Tssr37995 | transcription start site region 37995 | 1437 bp upstream | ||||||
Tssr37996 | transcription start site region 37996 | 1568 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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