rs248887014 SNP Detail

Summary

• ID
  rs248887014
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:118932068 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCCCTAGA CTCAGCCCCC
  TCCCTCTTTC TGACTGCTAT GGTGGATGGT GATTGGAGCC ATAAGACAGA CGTCTGCTTG
  AAGGCAAGCC TGGCCACCTT GGGCGGCATT TCCCTCTCTG GGCTTTAGTT GTGCTGTCTG
  TAAAGGAGAT ATGAACACAT CTTGGTTGCT TCAGAGGAAG ACTGGGGTCC CGTGCAGCGC
  Y
  GCCCCTCCCC CTCAGCTCCC TCAGCATCCT CTTCCCTACA TTCCTGTTAC TAAGCCTGTG
  TACTTGCACC AACAAGTCCC AGACCAAGGG AGCTGCTTTT CCTTGGTCCC TGTGGCCACG
  GTCACCCAGC ATTATTTAAC TCAGGGTCAG CGATAGAAGG CAGTATTCAC TGAATGCTAA
  GTGAAAACTT TTCTTAACCG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321285049	CHEV_4_118747476	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs248887014					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:118932068 () rs orientation: forward

Symbol	Name	Function Class
Gm35510	predicted gene, 35510	within coordinates
Rr377074	regulatory region 377074	436 bp downstream
Rr598481	regulatory region 598481	within coordinates
Rr598482	regulatory region 598482	1604 bp proximal
Tssr43077	transcription start site region 43077	1930 bp upstream
Tssr43078	transcription start site region 43078	1904 bp upstream