rs24884361 SNP Detail

Summary

• ID
  rs24884361
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:149057033 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTC TGCCCTGCGT GGACCTTCCC
  R
  TTGCTCCATC TTCCTAAGTT AGTCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss32476400	NES05012280	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A		G	A	G	A		G	A	A		A
ss45610667	mCV22582975	ABI	CRAMUS_MOUSE	f	SNP	A	A	A					G		A
ss148024396	ENSMUSSNP6352902	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A							A
ss321424054	CHEV_4_148346685	CHEVERUD	SCREENING_POP	f	SNP													A				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs24884361					SNP	A	A	A	A	A	A	A	G	G	A	G	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss32476400	NES05012280	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149057033 () rs orientation: forward

Symbol	Name	Function Class
Gm17029	predicted gene 17029	within coordinates
Pex14	peroxisomal biogenesis factor 14	Intron
Rr604811	regulatory region 604811	631 bp distal