rs247051414 SNP Detail

Summary

• ID
  rs247051414
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107544641 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAGTGTTCC CTCCCCCTCT CGGTTCCCCG
  TGCGCCGCAC CCCCTCCCCC CACCTGGGGC TAAGAAGTTG TTACCATTCT GGGCTCATTA
  GACTCTTGAA AGTTGCGAgg ggcgggggtg gggggggtgg gggggggtgg gggtgggggA
  R
  GGTTCATAAA ACTTTGCTTG TTTAAAAAAG TTTTCCTCAT TTCTGAAAGT GGGCAAGAGC
  GTATTCACTG GGTTGTCATT TCAGGAATTT TACAGGAAAC TGGCACCATT CAAAGAGTCT
  AAGTTTTaga taggaagtga ctttaatccc                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250041	CHEV_4_107360049	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs247051414					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107544641 () rs orientation: forward

Symbol	Name	Function Class
Gm12899	predicted gene 12899	684 bp upstream
Rr376978	regulatory region 376978	within coordinates
Rr597042	regulatory region 597042	557 bp proximal
Tssr38260	transcription start site region 38260	1045 bp upstream