rs246415091 SNP Detail

Summary

• ID
  rs246415091
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148083721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCTCAGTG GATGACATTC
  ACGTCCCCTC CAGTTCCACC CTGGAAAGTT GACTCTAGCC AAAAAAAGAT GGGCAAACCT
  TGAAATTGCA CTCCTGGGGC ACTGGTCAGG ATCATAGCTC TCCTAGGGCC ACATAGAGAC
  TTCAGATGTG GCTCAGAACA GAAAAGCAAC AGCACTTGTC TGAGGCCACC CGCCTCAGCC
  R
  TTCTTCAAGT CTTTGCCCAA CTCAAAGACC ATCTCCAGGA GGTAGGTCAT GTGACACACA
  CAGCAAGGAG CCCGAGTTCC CCCAGTAGGG CTGCTCGCCT AGTCCTCTCT GCTAATAATA
  ATCCCCAGGC ACACAATTAA GCAGTGAGCG CATCCCAGGG ACTCATCCGG AGGCGACAGT
  GTGAACTTGC ACAGATTTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321416324	CHEV_4_147373373	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs246415091					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148083721 () rs orientation: forward

Symbol	Name	Function Class
Gm13054	predicted gene 13054	1827 bp downstream
Nppa	natriuretic peptide type A	1458 bp upstream
Rr407043	regulatory region 407043	661 bp proximal
Rr604546	regulatory region 604546	968 bp proximal
Tssr40239	transcription start site region 40239	1369 bp upstream
Tssr40240	transcription start site region 40240	1471 bp upstream
Tssr40241	transcription start site region 40241	1827 bp upstream