rs243950855 SNP Detail

Summary

• ID
  rs243950855
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:129088059 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAT CAGGATGTCA AGGGATTTTA
  R
  TATTGTCATT ATTATGAAGC ATTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320504484	CHEV_2_129071875	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243950855					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:129088059 () rs orientation: forward

Symbol	Name	Function Class
Gm14024	predicted gene 14024	237 bp upstream
Rr373845	regulatory region 373845	within coordinates
Rr564890	regulatory region 564890	1923 bp distal
Rr564891	regulatory region 564891	1480 bp distal
Rr564892	regulatory region 564892	963 bp distal
Rr564893	regulatory region 564893	69 bp distal
Rr564894	regulatory region 564894	1328 bp proximal
Tssr20109	transcription start site region 20109	218 bp upstream