rs243282477 SNP Detail

Summary

• ID
  rs243282477
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138124633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCCCAAGTG CTTGGCATTC GCGATCTCCT
  CAAATCCTTC AGACAAGGCA GTTCAGGCTC ATGTGGTTGG AAGGAGATGG GTCACTCAGA
  ACCTAGTGAC CCCAGAGCTG GCCCTCGCCT TCTCTCTTCC CTCCAACCTT TGGCCATTCT
  K
  CATAGAGTCC AGGCACTTGT CTCCATCCTC TGGGGAGGGG CTCTAGAGTC CTGAAAAAAC
  AAACCAAAAC CAAACCAACC AAACAAACAA AAACCAGCCC TATGTCAGGA CACACAGTTA
  GTTCTCTGAG TTTAAGCCTC AGGCTTCCAG                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321373126	CHEV_4_137953237	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243282477					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138124633 () rs orientation: forward

Symbol	Name	Function Class
AB041806	hypothetical protein, MNCb-2457	within coordinates
Cpgi15151	CpG island 15151	689 bp distal
Fam43b	family with sequence similarity 43, member B	864 bp upstream
Rr602907	regulatory region 602907	1915 bp distal
Rr602908	regulatory region 602908	1888 bp distal
Rr602909	regulatory region 602909	304 bp distal
Tssr44164	transcription start site region 44164	885 bp upstream
Tssr44165	transcription start site region 44165	858 bp upstream