rs242907510 SNP Detail

Summary

• ID
  rs242907510
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:105722532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATGGCTAC CAAGGAAGGC
  CACAGTTGAT TTGAAGTGGG TAAAGTATTG TCAAAGATTC CAAGCCCCAC ATGTCAAGAG
  ATGTGAACTC ATTTATGTTG AATGGTCTAG ATGATGATAA TGCTTTGGGC TTGTTTCTTA
  GAGTGTAGTC TGGACTCTGG ACATTCTACA AAATTTAATT TCGAGTATAA GCAGAGCATA
  M
  TGACGACCAC CCCATAAGAA TTTGGATAGA AGGACGGCAG CAAGTGTGGG TCGGGGGAGC
  CTTGATCAGT GACAAGGTGT GAACAAGGCA GAGGCTTTGG GCTGACAAGG AACAGTCGCC
  AGACTTCAAA GCTTGTGATG AGGCTGACAG CATTGAGGAG CTGTGTAGAG ACTTGGCTGT
  CAGCCCTCCT GATAGTCACA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320863284	CHEV_3_105618134	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs242907510					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105722532 () rs orientation: forward

Symbol	Name	Function Class
Gm5547	predicted gene 5547	351 bp upstream
Rr582787	regulatory region 582787	within coordinates
Rr582788	regulatory region 582788	374 bp proximal
Rr582789	regulatory region 582789	917 bp proximal
Tssr31084	transcription start site region 31084	314 bp upstream