rs240849065 SNP Detail

Summary

• ID
  rs240849065
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:14714286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTGCTGGCG TCATTCAGGG
  GAATCGTGCT GAAACTGTTT AAAGACAAAT CAAATATCTT ATCCATTTAT TCATCAGGTA
  TTTGTGCATC TCCTCTGACA GTTACTACGC TAGGAGGTGG TGATAGCAGG ATTGCAGTCT
  CTGTTTTCAT ACTTGCATCC TAGTACCAGG AGAAGCAGTA ACAGAACCCT GTCTGTTTCA
  Y
  ACAGTAATAC AAGAGGAGGC CCGCAGACTG ACCTCAATGG TGGTCTCCTC TTTTTCACTG
  TTCACAGAGC TTTGAAAATA GCCATATTTT GCTATCATGA TTTTGAAAAT ATTTGTGTGT
  ACGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTACGTGTAT GTACCATCTG
  ATATGGGTGC TGAGAACTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320666905	CHEV_3_14649226	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240849065					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:14714286 () rs orientation: forward

Symbol	Name	Function Class
Car13	carbonic anhydrase 13	Intron
Rr374549	regulatory region 374549	within coordinates
Rr573698	regulatory region 573698	56 bp distal
Tssr28416	transcription start site region 28416	607 bp upstream