rs239634853 SNP Detail

Summary

• ID
  rs239634853
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107543637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCTTTTACG ACCACCACTT CAAAGATTGG
  TCCGTACTTT GAGAAGAGCT AGCCTAGAGA CTCACTGGTC TTAGTGGCTC ACTGGTGTAG
  AAACTCGGCG AGCCTCAGAA AAGAGTGATT CTAGCTCACG TGGAAGCCGT GGCTGAGCCA
  K
  CGAATCTTTC ATCCCTGACT CGGGGTTGGG GAAGACCTGG CACTGAGTCG CCTGAGCCTC
  CTGACTGGAG AGTCTGGGCT GTTTTAATTC TCGTGAATTT AGTTATTTCT GTGAAGCAAC
  CAAAATCTTA GAAAGGCTAG CACATGGCAC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250032	CHEV_4_107359045	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239634853					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107543637 () rs orientation: forward

Symbol	Name	Function Class
Gm12899	predicted gene 12899	1688 bp upstream
Rr376978	regulatory region 376978	993 bp upstream
Rr597042	regulatory region 597042	1561 bp proximal