rs238323362 SNP Detail

Summary

• ID
  rs238323362
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52661770 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTGGGAAC AATACTAAGA
  AAATATGTTT TCTAAGAGTG AGTGTATAAA ACAGGTAGAA AAATAGAAGC AAATTACCTT
  AAGTAAAAAT GGTGAGAGGG GGGTGGAGGC AGCATCTAGG TTTAGGTGAG AGACATAATT
  CTAACTGCAC AAGGCAGACC AATGTTGAAT TCCGTGATCA CTATTTTATA AGCAAATGGC
  R
  ATAAAAAGGA GAAAGGGAGG AGGAGGAAGG AGGAGCACGG TACAGTGGCA TGAGGCACCA
  TTCTGCATTG TTAAGGTTCT AAACCCCAAA TTTCCAAAAG GAGGAATTTC AGTGTCACTT
  GCTCCCCAGC CCATGGCGAT AAACCTCCAG AGTGCATGTC ACAGCCCCAA GTGACCCTGG
  TTGTGTCAGC AGCTCCACTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765067	CHEV_3_52558271	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238323362					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52661770 () rs orientation: forward

Symbol	Name	Function Class
Gm2447	predicted gene 2447	within coordinates
Rr576580	regulatory region 576580	99 bp proximal
Tssr33262	transcription start site region 33262	696 bp downstream