rs235916350 SNP Detail

Summary

• ID
  rs235916350
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:167118546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTATAATA ATAAAGTCTC
  TAAATAAGAG TCAAATGCTT AAACTGATAT TTACATTATA CAATACACAC ACAACATTGC
  ACAGTATCTT ACTAACATGT ACAACTTTTA ATGTTTTATG TGTCTGTTTA AAACTACCAT
  GTGCTAGTCG GGCACGCCTT TAATCCCAGC ACTCCGGAGG CAGAGGCAGA GGCAGGCAGA
  Y
  TTCTGAGTTC GAGGCCAGCC TGGTCTACAA AGTGAGTTCC AGGACAGCCA GGACTATACA
  GAGAAACCCT GTCTCGAAAA ACTAAAAACA AAAAAACAAA ACAAAACAAA ACAAAAAAAA
  AAACAACTAC CATTTGCTGG GGGCTGGAGA CAACTGTTAA GCACACTGAC TACTCTTCCT
  GAGTTCAACT CCCAGCATCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320089754	CHEV_1_169221108	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs235916350					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:167118546 () rs orientation: forward

Symbol	Name	Function Class
Gm57182	predicted gene, 57182	within coordinates
Mir6347	microRNA 6347	752 bp downstream
Rr422672	regulatory region 422672	515 bp distal
Rr422673	regulatory region 422673	1249 bp proximal