rs234738673 SNP Detail

Summary

• ID
  rs234738673
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103667425 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCTCTCTC CCCTCCCCCA
  CCTCTGCCTC CCCTCTCTCA TACACACATA TAGTTTCCAT CACGACATCA ACTCCACTAT
  GACACGTTGA GCAACCATCG CTGTTACCTA GTTTCAGAAT ACAAGTGCAT CATCATCAAT
  TATCATCCTC ATCATCATTT TAAAAAACGT TAGCATGTAC ACCCCCCCGC CCCCCCCCCC
  M
  CACACACACT CCAGTGCTTT TCAAGCCATC AGGACACAGG CACCCTCAAA GCCATTCATC
  TTCTCGGCCC TTCTGCTGAA GGCTTTGACC TTCAGGATGG CAGGCTGCTT AAAGAGCCTT
  CCCTTCCTCA GAACTTGCAA GTCGCTCACT GCACCACATC AGTGATTGGG GCAGCTCCAG
  TCTTGCTTTT GGCAGCTTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320442860	CHEV_2_103677237	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs234738673					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103667425 () rs orientation: forward

Symbol	Name	Function Class
Gm13875	predicted gene 13875	1874 bp upstream
Gm13877	predicted gene 13877	21 bp downstream
Gm75184	predicted gene, 75184	within coordinates
Rr561946	regulatory region 561946	1599 bp proximal
Tssr19174	transcription start site region 19174	1840 bp upstream