rs233833808 SNP Detail

Summary

• ID
  rs233833808
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:116138974 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTTGAGAT GATCTCTCAT
  TATATAGCTC TGGATAGTCT GGAAATCACT ATGTAGACCA GGCTAACCTT GAACTCATGC
  CTCTACCTCT CAAGTACAAG GGCTAATACT AAAACTTATG CCAGCATGCC CTAATCCTAT
  AGTTTGCTAT ATATTATCCA AGATTATATT TATGTATGTT TTATGCCTAT AATGATTTTT
  W
  AAAAAGATTT ATTTATTTAT CTTATATATA TGTGAGTGCA CTGTAGCTGT TTTCAGACAC
  ACCAGAAGAG GGCATGGGAT CCCATTACAG ATAGTTGTGA GCCACCATGT AGTTGATGGG
  AATTGAACTC AGGACCTCTG GAAGAGCAAT CAGTGCTCTT AACCACTGAG CTATCTCTCT
  AGCCCTATGA TTCTTTTATT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321277354	CHEV_4_115954382	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233833808					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:116138974 () rs orientation: forward

Symbol	Name	Function Class
Gm49337	predicted gene, 49337	Intron
Gm68669	predicted gene, 68669	within coordinates
Pik3r3	phosphoinositide-3-kinase regulatory subunit 3	Intron
Rr597898	regulatory region 597898	611 bp proximal