rs233649931 SNP Detail

Summary

• ID
  rs233649931
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:111330989 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAATAGACA ATAGGCACTG
  GTGTTACAGG CAGAGAGAAG ATGTAGGAGG AAGACCCAGG GCCATGCAGT TTTCCTAGAA
  ATGTCCACAA ACTGTCCCCA CTCTCATGTC TTGTTTTACC TCAGTCCCCA CACCCAGCTA
  AAATGTAAAA AAAAAAAAAA AAAAAAAAAC AAATTTCTTT CAGAAAAGTG TGGGAGTGCC
  Y
  TTCAAAGGTG AAATAAAAGG TGCAGTAACT GTGTAGCTTT ACTTCTCCTT CAGCCCTGCA
  AGAAGTCCAG TGTGGAGGCA GGATCAGCTG AGAGGCCAAG CTGCAGAGGT GAAGCAAGTT
  AAGGCTGTAG TGAGCACCTT AGACACTGGA CTTGGCTGTG AGATGTTAGC AGGGAATCAT
  GGGGATTTGA ACACGGAGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321261977	CHEV_4_111146397	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233649931					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:111330989 () rs orientation: forward

Symbol	Name	Function Class
Agbl4	ATP/GTP binding protein-like 4	Intron
Rr597468	regulatory region 597468	423 bp distal
Rr597469	regulatory region 597469	1594 bp proximal