rs233602083 SNP Detail

Summary

• ID
  rs233602083
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:15333895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GATATTCAG AGCAGAGAAT AAACTTTTAA
  AGTGCCAGCT TAATTTTACT CGTATTTGGC AGTCCAGGTT TGGTGGGGGA GGGGGAGGGG
  AAAGGAGAAG CAACTCCAAA CTGAAAGAAT CTCTGACACA TGACTAGCTA GCTACATTCC
  Y
  GACTCCTCAT TACCTGAGAA GAGAGAGGGC TGGGCAGAGT AGGCTGCAGC CCAGTAGGTG
  ATGAACAAAT CCTTGGTGGA GGGAACCCAG CTTCCGCAGC TCTCCTGTAT GACCTGGGAC
  GTCGAAAACA CTGCAGTGAG CTCTGTGGGC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325533079	CHEV_18_15359347	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs233602083					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:15333895 () rs orientation: forward

Symbol	Name	Function Class
Gm50035	predicted gene, 50035	274 bp downstream
Gm57822	predicted gene, 57822	within coordinates
Rr534370	regulatory region 534370	639 bp proximal