rs232935238 SNP Detail

Summary

• ID
  rs232935238
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107546330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATATATAT ATATATATAT
  ATATATATAT ATATATATAT ATATGTATAT ATATATATAT ATATGTGTAT TCCTGTTGAA
  GAATATTTGA TCACATTGTG AACCCTGAGA TTGTTATTTA CTGAAAAAAA AATGTTTCTA
  GTTATGAAGT AGGTAGCCCT TAGCACACAC CTTTAATCTC TCTGGCTGGA ATACAGACAC
  G
  CCTTTAGCAC ACATCTTTAA TCCCAAACAA TGAAGGTCAG GTTAGTTTGT AGAAGGAAGC
  AGCCGTGTTT GAAAGTGATG TCTAATTGAG TGGCAGACAA AGTGGTGAAC CAGAGAAAGG
  TATGAGAGAA TAGGATACGC CCAACTCTCA TGAGAAGAGA GAGGTAAGAG AAGCTGTTTA
  AGAGAGAGGA GTTTTAGAGA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250052	CHEV_4_107361738	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs232935238					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107546330 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	467 bp upstream
Gm12899	predicted gene 12899	455 bp downstream
Rr376978	regulatory region 376978	322 bp downstream
Rr597042	regulatory region 597042	444 bp distal
Tssr38260	transcription start site region 38260	640 bp downstream