rs230210893 SNP Detail

Summary

• ID
  rs230210893
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138188560 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGGT ATAATGAAGA ACAAACTAGA
  T
  GCTTGTCCTG GGTTCAAAAA TAATC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321373833	CHEV_4_138017164	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs230210893					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138188560 () rs orientation: forward

Symbol	Name	Function Class
Camk2n1	calcium/calmodulin-dependent protein kinase II inhibitor 1	1123 bp downstream
Gm70162	predicted gene, 70162	953 bp downstream
Rr2025	regulatory region 2025	1578 bp proximal
Rr602934	regulatory region 602934	1140 bp distal
Rr602935	regulatory region 602935	1323 bp distal
Rr602936	regulatory region 602936	1432 bp proximal
Rr602937	regulatory region 602937	1853 bp proximal
Rr602938	regulatory region 602938	1926 bp proximal
Tssr44170	transcription start site region 44170	1317 bp upstream