rs229243241 SNP Detail

Summary

• ID
  rs229243241
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:82455785 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACT TGGGGTGGAG GGGCAGAATC
  M
  CACTCTGGGC TAGGAGTTTC CTTGT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320819138	CHEV_3_82352400	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs229243241					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:82455785 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13290	CpG island 13290	within coordinates
Gm64983	predicted gene, 64983	641 bp downstream
Npy2r	neuropeptide Y receptor Y2	394 bp upstream
Rr578785	regulatory region 578785	529 bp distal
Rr578786	regulatory region 578786	within coordinates
Rr578787	regulatory region 578787	1558 bp proximal
Tssr33789	transcription start site region 33789	424 bp upstream
Tssr33790	transcription start site region 33790	376 bp upstream