rs226956375 SNP Detail

Summary

• ID
  rs226956375
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr19:45887373 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGATCATAG GAGCACACCA
  CCACACCTGG CTTCACTGAT TTTTCTAAAA CTACATCTTT TTTGGACAGC CCAGAAGTCC
  ACTCTCCCAT GCTGCCTGTA CTTTGTGTGA AGTTCACTGT TCTTAGAGAA GGGCTGTGTG
  TTTTGATTTG GAACAGCAGG GAAAGATGAG TGAAGTGACT GTGCAAAGAC GGCCGGCCGG
  G
  CACACAACAG TCCTCACATG GAGTCCTCTA GGAGTTACTC AAACAGCAGA CAAGGACAGT
  AGAGGCTGGC TGCGCCTACA TTCTGTTCTA AAGGTTCACT ATTCCCCTCA AATAGCAAGG
  AGATAGAGAT GAAGAAGGCA GACAGCCTGA TTCATGTACT CTCCTCCTGT CTGGAGGAAA
  GTTCTCTAGG GTTTTGTGTT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325821542	CHEV_19_45973424	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226956375					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:45887373 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Armh3	armadillo-like helical domain containing 3			Intron
				Noncoding-Transcript-Variant
Rr548612	regulatory region 548612			1997 bp proximal