rs224063974 SNP Detail

Summary

• ID
  rs224063974
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr19:45887995 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCACCTTGC TCAGCTATTT
  TTGATAGAGT GCTGTGGTTG TGAGATTGTG CTGGCCTTGA TCAGCATCCC AGAAAGAAGT
  GTCTGCTGGG AAACCTAGGC CCCAGGATGA TCCATCTTAT CTGGAACAAA CAATTTCAAA
  CAGGGGAGAC CACACAGCCC CGTGGGGCTG CAGCAATTTC CTCACTCCAA AGCCCCCCCC
  Y
  ATAAAGGGTT CCTCAGTTTC CCAGAGGAGG GAGGCTAATC CCCGCTGTGT GTGCTAACCA
  ACAGCCTCCT CTGAGGAGCG GACTCTGCCC TCTCTTTGCC TCCTAGCACC CTTTCCTCCC
  TCAATCATAG CACTTACAAC AGTACTGTGA ATAGATGAGC TCCTAACAGA CTTCATTAAC
  TCACAGGAGG CAAGAGAAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325821545	CHEV_19_45974046	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224063974					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:45887995 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Armh3	armadillo-like helical domain containing 3			Intron
				Noncoding-Transcript-Variant
Rr548612	regulatory region 548612			1375 bp proximal