rs223821393 SNP Detail

Summary

• ID
  rs223821393
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:14714069 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTCTCCGG AGCCAACAAG
  CCTGAGTCTC CTCCCAAAGT CAATTCCACA TTGATTACTC AAGCTCTCTA ATCTCCTTTC
  TATCTGCAAG GGAATGACTT TTAGCCCAGC TCAGATTTTG TTATGCAACA GCAAGAAGAA
  AAGCACAATA GAGCCCTTGA CTACTTTCCT TTAGCTGCCA TTCCATCCTG GGTCAATGCC
  R
  GCTGTGTAAT GAACACATTG CTGGCGTCAT TCAGGGGAAT CGTGCTGAAA CTGTTTAAAG
  ACAAATCAAA TATCTTATCC ATTTATTCAT CAGGTATTTG TGCATCTCCT CTGACAGTTA
  CTACGCTAGG AGGTGGTGAT AGCAGGATTG CAGTCTCTGT TTTCATACTT GCATCCTAGT
  ACCAGGAGAA GCAGTAACAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320666904	CHEV_3_14649009	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223821393					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:14714069 () rs orientation: forward

Symbol	Name	Function Class
Car13	carbonic anhydrase 13	Intron
Rr374549	regulatory region 374549	within coordinates
Rr573698	regulatory region 573698	within coordinates
Tssr28416	transcription start site region 28416	824 bp upstream