rs222751231 SNP Detail

Summary

• ID
  rs222751231
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:130040039 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGAGTTGCA GGGACCCTGT TTTAGAGAAG
  CTGGTCAACA GAGTGGAATT CAGGCAGGAA CCTGAATAAA ATGAGAAAAC TGCTTGGATA
  TAAAGGAGAA TCCCCAGGGG AAGTAGCATA TATGACAGAT GTTCCCTAAC TTGATGGGGG
  A
  AATAACCAGA TGTCCCTTGT GGCTCGTCCT GGCATGAAAA CCATGTTGTG TTTTCAAAGA
  AGGCAAAGGT GGGATATTAT TCCAACTGCA GCATGGAGCC ATAaagctat ggaaggtttg
  ggatgtagga gtggttccat ttatacttct                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319970933	CHEV_1_132008879	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222751231					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:130040039 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr417893	regulatory region 417893			361 bp proximal
Thsd7b	thrombospondin, type I, domain containing 7B			Intron
				Noncoding-Transcript-Variant