rs221973844 SNP Detail

Summary

• ID
  rs221973844
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:155871356 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAACT CCAAAATTGT CAGTACAGGT
  W
  GTGAGTCACC TTGTAGGTGC TGAGA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321442846	CHEV_4_155161008	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221973844					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155871356 () rs orientation: forward

Symbol	Name	Function Class
Rr606571	regulatory region 606571	721 bp distal
Rr606572	regulatory region 606572	1522 bp proximal
Tmem278	transmembrane protein 278	1025 bp upstream
Tssr44972	transcription start site region 44972	1966 bp upstream
Tssr44973	transcription start site region 44973	1945 bp upstream
Tssr44974	transcription start site region 44974	1881 bp upstream
Tssr44975	transcription start site region 44975	1860 bp upstream
Tssr44976	transcription start site region 44976	1847 bp upstream
Tssr44977	transcription start site region 44977	1825 bp upstream
Tssr44978	transcription start site region 44978	1019 bp upstream
Tssr44979	transcription start site region 44979	979 bp upstream