rs219494281 SNP Detail

Summary

• ID
  rs219494281
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107544053 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cctgcctcc ctccctcctt ttttctttgt
  gtagaatcta agtgaagtta ctcaggctgc cctggagccc cctcagaagc cctgctgtgg
  accccgaacc ccagatcacc tgacttaagc ttcccatgag gttcagttac agccagatcc
  W
  GCTACAAACA TTAATGACAG ATATTAAGTT ATTCATAAAT TTATTTTTAT AAAAGTTTGT
  GGCACTCTTG AGGGGTGTCA TCTGAAGTGG GTAGGGACAC AATAATACCT AAGCTTAGGG
  CACGATCTGC TCTATTTTTG TTTTGTtttt                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250037	CHEV_4_107359461	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219494281					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107544053 () rs orientation: forward

Symbol	Name	Function Class
Gm12899	predicted gene 12899	1272 bp upstream
Rr376978	regulatory region 376978	577 bp upstream
Rr597042	regulatory region 597042	1145 bp proximal
Tssr38260	transcription start site region 38260	1633 bp upstream