rs218232980 SNP Detail

Summary

• ID
  rs218232980
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:118284397 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGACA TCTAACTCCT CCCCCACCCC
  C
  ACCCCTGCAA CGTTGTCTGG CTTTC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321283181	CHEV_4_118099805	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs218232980					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:118284397 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14684	CpG island 14684	586 bp proximal
Elovl1	ELOVL fatty acid elongase 1	924 bp upstream
Rr598392	regulatory region 598392	1837 bp distal
Rr598393	regulatory region 598393	403 bp proximal
Rr598394	regulatory region 598394	1048 bp proximal
Tssr38657	transcription start site region 38657	302 bp downstream
Tssr38658	transcription start site region 38658	878 bp upstream
Tssr38659	transcription start site region 38659	1596 bp upstream