rs216042176 SNP Detail

Summary

• ID
  rs216042176
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101218018 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATTCATTA TCCACCAGGA
  GGAATTCAGT AATGGATAAG ACACTAGGCT TTGTCTATTG GGAAATCTAG CAAGTTAATA
  ATACACATAT TGGTTCAACT TCCTCAAGAA GTATGTGATT GGCTGGTGGT AGCCCACATC
  TGTAATTCCA GTATTTGGGG GTGGGGGTGG GGCACTGGAG CAAGAGACTC AGGAGTTGAA
  S
  GTTAGTCTCC CTTACAAAAT GAGCTTGAGA CCAGTTTACA GGGTTACATG AGACCCTAGC
  TGAGGAAGTG AGTGAGTCTA AATTGAAGTG TGTGACTGGC ACAGGTTTCA AGCAAGAAAA
  ACTTTATGTA TCTATATTTT TGGGTTTTCT TCTCCCTACG GCTTTTATTC CTTAAGACAG
  AAATTACCCT CGAGAAGGTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321229530	CHEV_4_101033426	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216042176					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101218018 () rs orientation: forward

Symbol	Name	Function Class
0610043K17Rik	RIKEN cDNA 0610043K17 gene	within coordinates
Gm12795	predicted gene 12795	1356 bp downstream
Rr596131	regulatory region 596131	1980 bp distal
Rr596132	regulatory region 596132	1357 bp distal
Rr596133	regulatory region 596133	1144 bp proximal