rs214817603 SNP Detail

Summary

• ID
  rs214817603
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:67657711 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCTCATCC TATATTTTAA
  TAAGATCCTC CAGTGACTCA TACTCATAGT AAAGTGTAGA ATGTACAGAT CTAATCACAC
  ATTTGTCAAT GCACAGGTCA AAACAAAACA AAACAAACAA AACAAAACAA AAACAACCCT
  CCATTTAGCA TGAAGATATA AAAACAAGAC AGGTCTGGGA GAAGAGCTAA GAGGTAGGTC
  R
  TTTGCATGGC ATGCATAAGT TCCTAAGATC CTAAGATATG ATCATCTCTG ATAGAAGAAA
  ACAAGAATGA TGACTTGACT TACTTCAGCT GTGTGTGATG AGGTGTTAAA AGAAATGTTC
  AGGACTCAGT GAGTTGCAGC AATGTTGTAC ACTGGAGAAA GAGCTCAGCT AGGATCCATG
  CCTGTCACAA AAGCCACCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	LG/J	NON/ShiLtJ
ss368653898	MGP_WTSI_6_67630721	EVA_MGPV3	EVA_MGPV3	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	LG/J	NON/ShiLtJ
rs214817603					SNP	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss368653898	MGP_WTSI_6_67630721	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:67657711 () rs orientation: forward

Symbol	Name	Function Class
Igk	immunoglobulin kappa chain complex	within coordinates
Rr379537	regulatory region 379537	1192 bp upstream
Rr631677	regulatory region 631677	736 bp proximal