rs214708364 SNP Detail

Summary

• ID
  rs214708364
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138918125 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAGTCAGTC CTCTTACCCA CTGAGCCAGC CCATCCACCC
  TGTTTTTTGA CCCAGCGTCT CTCATAGAAT TCGTCTTCTC TCTGTATAGT CCTGGCTGTC
  C
  TGGAGCTTGC TATGTAGAGT AGATTGGCCT TGAACTCCCA GAGATCCTCC TGCCTCTGCC
  TTCTGAGTGC TGGGATTATA GGTATATACC ACCATAGGC                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321380201	CHEV_4_138746729	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214708364					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138918125 () rs orientation: forward

Symbol	Name	Function Class
9530077C14Rik	RIKEN cDNA 9530077C14 gene	1038 bp downstream
Cpgi15162	CpG island 15162	1531 bp proximal
Rr377279	regulatory region 377279	within coordinates
Rr603133	regulatory region 603133	822 bp proximal
Rr603134	regulatory region 603134	1893 bp proximal
Tssr44214	transcription start site region 44214	1641 bp downstream
Tssr44215	transcription start site region 44215	1800 bp downstream
Tssr44216	transcription start site region 44216	1827 bp downstream
Tssr44217	transcription start site region 44217	1850 bp downstream