rs214551860 SNP Detail

Summary

• ID
  rs214551860
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:9466169 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCC TGTTTGCTCT TCAGAACTCA
  R
  GCAGAAGCCT GACCTATAGC CATGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320650888	CHEV_3_9401109	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs214551860					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9466169 () rs orientation: forward

Symbol	Name	Function Class
C030034L19Rik	RIKEN cDNA C030034L19 gene	1911 bp upstream
Gm55345	predicted gene, 55345	1066 bp upstream
Rr374488	regulatory region 374488	1046 bp downstream
Rr573418	regulatory region 573418	within coordinates
Rr573419	regulatory region 573419	737 bp distal
Rr573420	regulatory region 573420	1730 bp proximal
Rr573421	regulatory region 573421	1982 bp proximal
Tssr28343	transcription start site region 28343	1885 bp upstream
Tssr28344	transcription start site region 28344	1940 bp upstream