rs213166640 SNP Detail

Summary

• ID
  rs213166640
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:15332739 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCTGGTCTG GCCACAGCAA GTGCTTTTAC
  CTGCTGGGCT GCCTCACCAG GCTGATGGTG CAACTTCTTA AAGCTATAAT GACGGGCACT
  gggacagctc cgtgaacaaa ggtgctggct gccacacctg agtgtggtcc ccagaatcca
  M
  tcggtaaagg acagaataga ccctggaggt tgtcctctga tgtcatccat gtcatccatg
  taccatggta cTTACTGTGT ACTGCTCCAT CATATGCATA CATGTTTAGA GAAAGTTCAT
  GGCACATATG AACAACTACA TGCGTTTATA                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325533064	CHEV_18_15358191	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs213166640					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:15332739 () rs orientation: forward

Symbol	Name	Function Class
Gm50035	predicted gene, 50035	1430 bp downstream
Gm57822	predicted gene, 57822	within coordinates
Rr534370	regulatory region 534370	1795 bp proximal