rs13471995 SNP Detail

Summary

• ID
  rs13471995
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  121
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:95400530 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACCAGTGA GTGAGTCCTG
  CTGGTCTTGA TGTAGCCCTA CTGTTCTCTA TGACTCTAAG CATTATTTTT AAGAAACTTA
  TTTTTATAGA TGAAAACTCA GGCTAACCTA GTGAGTATGA TCTTGGAATG CCCATGATCA
  ACCACTTAAA GATCAAAGTA TTATATGCTG TGTGCTTCGT AGCTGTGAGT GTTGCGAGTG
  Y
  GAATGTGCTT TCCGACGGGT TCTCCTTGCT GGGCACCAGA ACAAAGAGGC TGTGTGCTAG
  AAGTGGACCG CGGCTCTGTC AGGACAGCAT GCGAGGTGTG CTTGTGCATG CTTGTGTGCA
  GTCCTTCGTG TAGGCCAGTG AGCTGGGGGG GTTATTGGGG GTAGGGACTC TGCTGTTTGT
  TTTCATACAA TCTCTCCTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47626889	NES11436982	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs13471995					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47626889	NES11436982	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95400530 () rs orientation: forward

Symbol	Name	Function Class
Arl2bp	ADP-ribosylation factor-like 2 binding protein	mRNA-UTR
Gm45767	predicted gene 45767	1704 bp upstream
Pllp	plasma membrane proteolipid	993 bp downstream