rs108581737 SNP Detail

Summary

• ID
  rs108581737
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161616800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGACTTCAGT CTTCTGGCCA CACACACACA CACACACACA
  CAAGTCTTCT GGCCACACAC ACACACACAC ACACACACAC ACAAGTCTTC TGGCCACACA
  S
  ACACACACAC ACACACCATT TATGTCTAAT AACCTCTAAG AACTCAGTCT CGGTTCCCAT
  TACTTTCCCA TATAAACCAT ATAAATCCCA ATAAGTTCC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss145922222	ENSMUSSNP2281389	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs108581737					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161616800 () rs orientation: forward

Symbol	Name	Function Class
Fasl	Fas ligand	736 bp upstream
Rr421846	regulatory region 421846	560 bp distal
Tssr14586	transcription start site region 14586	856 bp upstream
Tssr14587	transcription start site region 14587	775 bp upstream
Tssr14588	transcription start site region 14588	760 bp upstream
Tssr14589	transcription start site region 14589	748 bp upstream
Tssr14590	transcription start site region 14590	735 bp upstream
Tssr14591	transcription start site region 14591	725 bp upstream