rs108524077 SNP Detail

Summary

• ID
  rs108524077
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103668910 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGGCCAGCC TGGTCTACAG AGTGAGTTCC AGGACAGCCA
  GGGCTATACA GAGAAACCCT GTCTCGAAAC ACCCCCCACC CAAAAAAAAA AAAAAAAAGT
  A
  AGACAAGGGC TGGAGAGATG GCTCAGCAGT TAAGAGCACT GACTGCTCTT CCAGAGGTCA
  TGAGTTCAAT TTCCAGCAAC CACATATTGA CTCACAATC                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147139618	ENSMUSSNP1756063	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs108524077					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103668910 () rs orientation: forward

Symbol	Name	Function Class
Gm13875	predicted gene 13875	389 bp upstream
Gm13877	predicted gene 13877	1048 bp upstream
Gm56363	predicted gene, 56363	544 bp upstream
Gm75184	predicted gene, 75184	within coordinates
Rr561946	regulatory region 561946	114 bp proximal
Tssr19174	transcription start site region 19174	355 bp upstream