rs108287548 SNP Detail

Summary

• ID
  rs108287548
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:120682310 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAAT TAACTTGAAC TGGAAAAGTG
  R
  ACAATTCTCT TCAGACAAAC CAGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss135709347	ENSMUSSNP695251	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs108287548					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:120682310 () rs orientation: forward

Symbol	Name	Function Class
6530403H02Rik	RIKEN cDNA 6530403H02 gene	1577 bp upstream
Rr583993	regulatory region 583993	1673 bp distal
Tssr35394	transcription start site region 35394	1915 bp upstream