rs108249434 SNP Detail

Summary

• ID
  rs108249434
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:119390355 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATACACAGCT ACTCTTTTTT GTTTGTTTTT GTTCTTTTAT
  TTTGTTTTAT TTTTGTGTTT TGTTTTGTTT TTTTACAGCA ACTCATAAAG GAAAAACATG
  Y
  CATTGGGGCT GGCTTATAGT TTCAAAGGTT CAGTCCATTA TCCTCATGGT GGGAAGCATG
  GCAGCCTCCA GACAGACATG GCGCTGGAGG AACTGAGAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss133589270	ENSMUSSNP6332224	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss321927871	CHEV_6_119363412	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs108249434					SNP	T	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119390355 () rs orientation: forward

Symbol	Name	Function Class
Adipor2	adiponectin receptor 2	Intron
Rr637669	regulatory region 637669	997 bp proximal