rs108150542 SNP Detail

Summary

• ID
  rs108150542
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106963418 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGAGAATTA GATACTCTTA
  CATCTACCTC ATGCCACCTT TGTCCAGCTC CCTGTCGGAG GGTGAGCTAG CTCCTTTTCC
  TGTGCCTGCT GTGCTGACGT GATGTGTGTA TAGAAGAGTG GATGAGCTTC AGAGAATTCA
  CAGCCCACTG AGAAAGATGG GTGGTACAGC AAAAAGCCAA CTGCCATGAG TGCAAACAGG
  W
  GGAATCACAG GGGACTTCCT GGAGGAAGAA TCAAGCAGAG CCTCAAAGAA GTCAGCCCAG
  AGGGCATGAA TGGTATATAC AGAGGGCAGA GGGCAGAGGG CAGGCGGCTG AGAGCAAGGC
  TGGCATGTAG GCAGAATGTT GGCTTTTATA CCTGAGATAG ACAAGGGTGT GAGGCACAGA
  GGAAAGGTCC GCCTGGCTCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss147175410	ENSMUSSNP3443237	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs108150542					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106963418 () rs orientation: forward

Symbol	Name	Function Class
Cdcp2	CUB domain containing protein 2	Intron
Rr596924	regulatory region 596924	1917 bp proximal