rs108057380 SNP Detail

Summary

• ID
  rs108057380
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:170600976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C CCGGTTTCAG GGGATCCAAC AGGCACGCAC AGGGCACACA
  TGCATGCATT CAGGCAAAAC ATTTATACAC ACAAAATGAA AATAAATAAA CCTAAAAAGA
  M
  CAGAGAGACA GAGAGAGAGA GAGAGAGAGA GAGAGAGACA GACAGAGAGA GACAGAGAGA
  GACAGAGAGA CAGAGAGACA GAGAGACAGA GAGAGAGACA G                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148298799	ENSMUSSNP7155035	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs108057380					SNP	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:170600976 () rs orientation: forward

Symbol	Name	Function Class
D2Mit344	DNA segment, Chr 2, Massachusetts Institute of Technology 344	849 bp distal
Dok5	docking protein 5	Intron
Rr571508	regulatory region 571508	287 bp distal