Sequence Detail

ID/Version

J01420 (GenBank | ENA | DDBJ)

Version: J01420.1

Sequence description from provider

Mouse mitochondrion, complete genome.

Provider

GenBank/EMBL/DDBJ:Rodent

Sequence

DNA 16295 bp

Source

Library
Organism	mouse
Strain/Species	Not Specified
Sex	Not Specified

Age	Not Specified
Tissue	Not Specified
Cell line	LA9 and lll-0B3*

* Value from GenBank/EMBL/DDBJ could not be resolved to an MGI controlled vocabulary.

Annotated genes and markers

Follow the symbol links to get more information on the GO terms, expression assays, orthologs, phenotypic alleles, and other information for the genes or markers below.

Type	Symbol	Name	GO Terms	Expression Assays	Orthologs	Phenotypic Alleles
Gene	mt-Atp6	mitochondrially encoded ATP synthase 6	12	103	3	2
Gene	mt-Atp8	mitochondrially encoded ATP synthase 8	11	98	2	2
Other Genome Feature	mt-Att	mitochondrial membrane attachment site	0	0	0	0
Gene	mt-Co1	mitochondrially encoded cytochrome c oxidase I	23	109	3	2
Gene	mt-Co2	mitochondrially encoded cytochrome c oxidase II	17	103	4	0
Gene	mt-Co3	mitochondrially encoded cytochrome c oxidase III	12	100	3	3
Gene	mt-Cytb	mitochondrially encoded cytochrome b	31	96	3	5
Other Genome Feature	mt-Dcr	mitochondrial d-loop control region	0	0	0	0
Gene	mt-Nd1	mitochondrially encoded NADH dehydrogenase 1	26	97	3	3
Gene	mt-Nd2	mitochondrially encoded NADH dehydrogenase 2	21	98	3	6
Gene	mt-Nd3	mitochondrially encoded NADH dehydrogenase 3	19	98	3	1
Gene	mt-Nd4	mitochondrially encoded NADH dehydrogenase 4	24	96	3	3
Gene	mt-Nd4l	mitochondrially encoded NADH dehydrogenase 4L	14	97	3	2
Gene	mt-Nd5	mitochondrially encoded NADH dehydrogenase 5	21	98	3	5
Gene	mt-Nd6	mitochondrially encoded NADH dehydrogenase 6	19	98	3	8
Other Genome Feature	mt-Olr	mitochondrial light strand origin of replication	0	0	0	0
Gene	mt-Rnr1	mitochondrially encoded 12S rRNA	4	96	1	14
Gene	mt-Rnr2	mitochondrially encoded 16S rRNA	4	98	1	2
Gene	mt-Ta	mitochondrially encoded tRNA alanine	2	96	1	2
Gene	mt-Tc	mitochondrially encoded tRNA cysteine	2	96	1	0
Gene	mt-Td	mitochondrially encoded tRNA aspartic acid	2	96	1	0
Gene	mt-Te	mitochondrially encoded tRNA glutamic acid	2	96	1	0
Gene	mt-Tf	mitochondrially encoded tRNA phenylalanine	2	96	1	0
Gene	mt-Tg	mitochondrially encoded tRNA glycine	2	96	1	1
Gene	mt-Th	mitochondrially encoded tRNA histidine	2	96	1	1
Gene	mt-Ti	mitochondrially encoded tRNA isoleucine	2	96	1	0
Gene	mt-Tk	mitochondrially encoded tRNA lysine	2	96	1	2
Gene	mt-Tl1	mitochondrially encoded tRNA leucine 1	2	96	1	1
Gene	mt-Tl2	mitochondrially encoded tRNA leucine 2	2	96	1	1
Gene	mt-Tm	mitochondrially encoded tRNA methionine	2	96	1	0
Gene	mt-Tn	mitochondrially encoded tRNA asparagine	2	96	1	0
Gene	mt-Tp	mitochondrially encoded tRNA proline	2	96	1	0
Gene	mt-Tq	mitochondrially encoded tRNA glutamine	2	96	1	0
Gene	mt-Tr	mitochondrially encoded tRNA arginine	2	96	1	3
Gene	mt-Ts1	mitochondrially encoded tRNA serine 1	2	96	1	0
Gene	mt-Ts2	mitochondrially encoded tRNA serine 2	2	96	1	1
Gene	mt-Tt	mitochondrially encoded tRNA threonine	2	96	1	0
Gene	mt-Tv	mitochondrially encoded tRNA valine	2	96	1	0
Gene	mt-Tw	mitochondrially encoded tRNA tryptophan	2	96	1	0
Gene	mt-Ty	mitochondrially encoded tRNA tyrosine	2	96	1	0

MGI curated clones/probes annotated to sequence

Name	Clone Collection	Clone ID	Type
mt-Tf probe1			mitochondrial
mt-Rnr1 probe1			mitochondrial
mt-Tv probe1			mitochondrial
mt-Rnr2 probe1			mitochondrial
mt-Nd1 probe2			mitochondrial
mt-Ti probe1			mitochondrial
mt-Tq probe1			mitochondrial
mt-Tm probe1			mitochondrial
mt-Tw probe1			mitochondrial
mt-Ta probe1			mitochondrial
mt-Tn probe1			mitochondrial
mt-Tc probe1			mitochondrial
mt-Ty probe1			mitochondrial
mt-Co1 probe2			mitochondrial
mt-Td probe1			mitochondrial
mt-Co2 probe2			mitochondrial
mt-Tk probe1			mitochondrial
mt-Atp8 probe2			mitochondrial
mt-Atp6 probe2			mitochondrial
mt-Co3 probe2			mitochondrial
mt-Tg probe1			mitochondrial
mt-Nd3 probe2			mitochondrial
mt-Tr probe1			mitochondrial
mt-Nd4l probe2			mitochondrial
mt-Nd4 probe2			mitochondrial
mt-Th probe1			mitochondrial
mt-Nd5 probe2			mitochondrial
mt-Nd6 probe2			mitochondrial
mt-Te probe1			mitochondrial
mt-Cytb probe2			mitochondrial
mt-Tt probe1			mitochondrial
mt-Tp probe1			mitochondrial
mt-Tl1 probe1			mitochondrial
mt-Tl2 probe1			mitochondrial
mt-Ts1 probe1			mitochondrial
mt-Ts2 probe1			mitochondrial
mt-Nd2 probe2			mitochondrial
mt-Att probe1			mitochondrial
mt-Olr probe1			mitochondrial

Sequence references in MGI

J:22484 Bibb MJ, et al., Sequence and gene organization of mouse mitochondrial DNA. Cell. 1981 Oct;26(2 Pt 2):167-80