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MTF#1985 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#1985
  • Sequence Type
    cDNA
  • ID
    MGI:3507169
  • Region Covered
    Nucleotides 357-904 of GenBank Accession ID AF492703.
  • Vector Type
    Plasmid
  • Insert Size
    0.548kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers AAGGTCAACAAGCACCCGGACC and AACTCAGGAGGTGTTCCCCTGC. Template sequence provided by Paul Gray:
    GGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTAACTCAGGAGGTGTTCCCCTGCC
    TGTTCTGTTATCTTTTCAATAGAAGCCAGGCAGCTCTGAAGGGGATGGTCCATATGAATT
    ACTACTGGAAGGTGATGGCCAAGGGCAAACGAAGACGGTTCCCACATCATCTTTCATTAA
    AATCCAAAGGCAAGCCACACCCCTGCCCCCAGCCAAGCCATCACTTTACACAGAACTGCA
    TTTAGCTCCCTGTTATTTTGGATTTTTTTTTTTTTAGTTATATACATAAAAAAAAAAAAC
    ACATTGTGTTAAATAGCAGGACAGCAAAACAATGAGACATTCAACACTGCACTGAAACAT
    CAAAACAGCCTGGGTAAGCCGAGGGAAGGAAGAAGAGATGGAGTTCCAAGAGCAAGCTCA
    AGGGCCTGGCTCCCTAGTCCGTAACAGATCTGCATTCCGAAGGCAAGCCTTCTGACCGCC
    GCCACTCTGCCAGGCGCTGCTTAAACCATTTCTGCGTCTGCTCCTCCGTGAGACCCGCCT
    CGGCTGCGATGAGGCACAGCGTGGTGGGGTCCGGGTGCTTGTTGACCNTTAAGCCGAATT
    CCAGCACACTGGGGGGNCGTTTACTAGTGGATCCGAGCTCGGTANCNAAGCTTGATGCAT
    AGGCNTGGAGTATTCCTATAAGTGNTCACCCTAAAANAGCNTGGGGCGTAAATCNTGGGG
    TCATTAGCTGNTTTCCCNTGTGGTGAAAATTGTTATCCCNCNCCNAATTTCCCCCACNAA
    CANTACGAAGCCNGGGAANCNTTAAAGGGTNAAAGNCCTGGGGGGTGNCCTTATNGAGGN
    GAACCTAACNCCCCTTTTAANTTGGGGTTGGCGCNCNNNTNGGCCCGNTTTTCCGGTCCG
    GNAAAACCTGTCCNGGCCACANCTGCTTTNTATNNGAATCGGCACCANNCNCNCGGGGAA
    AAAGNNNGTTTGNTTNATTGGGGGGGNTTTTTCCGGTTCCCCGGTNCAGNAAANTNCTTG
    NCCCGGNTCTTTNGGNTTTGNGGAAAGGGATTNCNCTNTCNCAAANGGGGGNAATACGGT
    TTNTNCNNCAGAACCNGGGGGTAAACCCNGGGGAAANAAANGGGGGGAAAANAGGCCGCA
    AAGGGCCGNNCCCTTAAAGNGCGGTTNGTGGGNNTTTCCNNAGGGCCCCCCCCCGGGAGN
    AAANAAAA
  • Synonyms
    GUDMAP:6732 probe, GUDMAP:7262 probe, GUDMAP:12789 probe, GUDMAP:12790 probe, maprobe:1259
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Hopx HOP homeobox
Expression
  • Assay Results
    31
Sequences
AF492703 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory