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MTF#1297 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#1297
  • Sequence Type
    cDNA
  • ID
    MGI:3506810
  • Region Covered
    Nucleotides 97-440 of GenBank Accession ID AK012465.
  • Vector Type
    Plasmid
  • Insert Size
    0.343kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers GCGGCCATGTCTTCAGATGC and AACGCTGCAGACAAGGCAGG. Paul Gray provided two sequence files for this probe. Sequence 1:
    GCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTAACGCTGCAGACAAGGCAGGC
    GCAGATCACAGAGATGCAGCAGCTTTTTCAATGAACTGGGCCAACTTCACATCCCGCTTG
    GTCAGGCCGCCACAGTCATGCGAGGTGAGGGTTATCTGGACTTTGTTGTAGACGTTGAAC
    CATTCCGGGTGGTGATTCATCTTCTCTGCTTGCAGGGCAACCCTGGACATAAAGCCAAAC
    GCCTGATTGAAATTTTTGAAGGAGAACTCTTTGTAGATGGCATCTCTCTCACTCAGTTCC
    GACCACCCTGCTGCTTTCAAGCCAGGAATAAGTTAGTCCCTCTCCTCTGCCGCCAACCAC
    TGTGCATCTGAAGACATGGCCGCAAGCCGAATTCCAGCACACTGGCGGCCGTTACTAGTG
    GATCCGAGCTCGGTACCAAGCTTGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAAT
    AGCTTGGCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTCACAATT
    CCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGC
    TAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTGTCGTGC
    CAGCTGCATTAATGAATCGGCCAACGCGCGGGGAGAGGCGGTTTGCGTATTGGGCGCTCT
    TCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGCGGCGAGCGGTATCA
    GCTCACTCAAAGGCGGTAATACNGNTATCCACAGAATCAGGGGATNACGCAGGAAAAAAC
    ATGTGAGCAAANGNCAGCAAAAGGNCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTT
    TCCATANGCTCCCCCCCCCCTGACGAGNATCACAAAAATCGACCCTCAAGTCANAGGTGGNGNAACCCCGNCGGGACTTTAAANNACCANGNGNTTNCCC Sequence 2:
    GNTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTAACGCTGCAGACAAG
    GCAGGCGCAGATCACAGAGATGCAGCAGCTTTTTCAATGAACTGGGCCAACTTCACATCC
    CGCTTGGTCAGGCCGCCACAGTCATGCGAGGTGAGGGTTATCTGGACTTTGTTGTAGACG
    TTGAACCATTCCGGGTGGTGATTCATCTTCTCTGCTTGCAGGGCAACCCTGGACATAAAG
    CCAAACGCCTGATTGAAATTTTTGAAGGAGAACTCTTTGTAGATGGCATCTCTCTCACTC
    AGTTCCGACCACCCTGCTGCTTTCAAGCCAGGAATAAGTTAGTCCCTCTCCTCTGCCGCC
    AACCACTGTGCATCTGAAGACATGGCCGCAAGCCGAATTCCAGCACACTGGCGGCCGTTA
    CTAGTGGATCCGAGCTCGGTACCAAGCTTGATGCATAGCTTGAGTATTCTATAGTGTCAC
    CTAAATAGCTTGGCGTAATCATGGTCATAGCTGTTTCCTGTGTGAAATTGTTATCCGCTC
    ACAATTCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGCCTGGGGTGCCTAATGA
    GTGAGCTAACTCACATTAATTGCGTTGCGCTCACTGCCCGCTTTCCAGTCGGGAAACCTG
    TCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGGGGGAGAGGCGGTTTGCGTATTGG
    GCGCTCTTCCGCTTCCTCGCTCACTGACTCGCTGCGCTCGGTCGTTCGGCTGCGGCGAGC
    GGTATCAGCTCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGG
    AAAGAACATGTGAGCAAAAGGNCAGCAAANGNCAGGAACCGTAAAANGNCGCGNTGCTGG
    GNTTTTNCATAGGCTCCGCCCCCTGACGANNTCANAAAATCGACGCTCAGTCANAGGGGN
    GAAACCGACNGNCTANAAGANNCAGGCGTTNCCCCTGGANCTCCCCGNGNCTCTCNGTTC
    GACCNGNCNTTACGGAANTNNNCGCNTTNCCCTCGGNANNGGGGCTTCCNNANNNCNNGG
    AGGATCCAT
  • Synonyms
    GUDMAP:6163 probe, maprobe:810
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Pcbd2 pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2
Expression
  • Assay Results
    13
Sequences
AK012465 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory