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MTF#1184 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#1184
  • Sequence Type
    cDNA
  • ID
    MGI:3506731
  • Region Covered
    Nucleotides 1321-2060 of GenBank Accession ID AK016557.
  • Vector Type
    Plasmid
  • Insert Size
    0.739kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CAGTTGAAGAGGAGACCACCG and GCAGGCAGTATCAGTTCAGGC. Template sequence provided by Paul Gray:
    GNTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTCAGTTGAAGAGGAGA
    CCACCGGACTACATCCCAAAGAAAATGAAGAAACATGTTGAAGGGAAGTCGTTGAAGGGG
    AAAGACAGAGCTGACGGGTCTGGCTACGGCTCCGCTCTTCCTCCCGAGAAGCTGCCCTAC
    TTAGTAGAGCTAAGCCCAGGGAGAAGGAATCACTTTGCCTACTACAGCTATCACACTTAC
    GAAGATGGCTCTGACTCCAGAGACAAGCCAAAGTTATACCGCCTTCAATTAAGTGTGACT
    GAAGTTGGGACAGAGAAATTTGGTGACAATTCTATCCAGCTGTTTGGCCCCGGAATTCAG
    CCCCATCACTGTGATCTCACCAACATGGATGGAGTGGTCACTGTGACACCCAGAAGTATG
    GATGCAGAGACCTACGTGGATGGTCAGCGCATCTCAGAGACCACAATGCTGCAGAGTGGC
    ATGAGACTGCAGTTTGGCACCTCGCATGTGTTTAAGTTTGTGGACCCCATCCAGGACCAC
    GTTCTTTCCAAGAGATCTGTGGATGGAGGCCTGATGGTCAAGGGCCCAAGACATAAACCT
    GGAGCTGTTCAGGAGACAACCTTTGAATTGGGAGGAGATGTCCACAGTGGGACAGCATTG
    CCGGCAAGCAGGAGCACTACTAGACTGGACAGTGACAGGGTGTCCTCTGCCTCTAGCACA
    GCTGANCGAGGGATGGTGAAGCCGATGATCCGACTGGANCAGGAGCAGGAATATCGACGA
    CGAGAAAACAGGACTCAGGATGCTACTGGGCCCTGAACTGATACTGCCTGCAAGCCGAAT
    TCCAGCNCACTGGCGGCCGTTANTAGTGGATCCGAGCNTCGGTACCANGCTTGATGCANA
    GCTTGAGTATTCTATAGTGNCCCCTAAATAGCTTGGNGTAAACANGGGCCAAANCNGNTT
    CCNGNGTGNAAATTGTTNTNCGCCCCNANTNCCCCNAANATACNAGCCCGGANGCCTAAA
    GGGTAAAGCCGGGGGGGNCTNANGGNGGNCNNACCCCACTTAANTNGGGTTGGGNTCCCN
    GGCCNCTTTTCNATTGGGNAAANNGGCNNGCNC
  • Synonyms
    GUDMAP:6070 probe, GUDMAP:13844 probe, maprobe:730
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Afdn afadin, adherens junction formation factor
Expression
  • Assay Results
    21
Sequences
AK016557 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
05/28/2024
MGI 6.13 		The Jackson Laboratory