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MTF#1172 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#1172
  • Sequence Type
    cDNA
  • ID
    MGI:3506719
  • Region Covered
    Nucleotides 561-1275 of GenBank Accession ID AF284439.
  • Vector Type
    Plasmid
  • Insert Size
    0.714kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers GATCTGCAGGTCTTCCCGTTCC and ATCCAGTGTGCACAACCGTCC. Template sequence provided by Paul Gray:
    GCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTGATCTGCAGGTCTTCCCGTTC
    CTTCATGGATCTGAAGGCTCTTCTCTCGTCCTTGAATGACTTTGCATCCCTCTCATTTGC
    TGAGAGCTGGGACAATGTGGGATTACTGGTGGAGCCAAGCCCACCCCATACTGTAAATAC
    ACTCTTCCTGACCAATGACCTGACGGAGGAGGTCATGGACGAGGCTCTGCAAAAGAAGGC
    AGACTTCATTCTCTCCTACCATCCACCTATTTTCCGGCCCATGAAGCACATAACTTGGAA
    AACCTGGAAGGAGTGTCTCGTGATCCGGGCTCTGGAGAACAGAGTCGCTGTCTACTCTCC
    CCACACAGCCTATGATGCGGCACCCCAGGGAGTCAACAGCTGGTTGGCCAAAGGGCTTGG
    AACTTGCACTACCAGGCCCATCCACCCTTCCAGAGCTCCAGACTACCCCACAGAGGGAGC
    TCACCGACTAGAATTCAGTGTGAACCGCAGCCAAGACCTGGACAAAGTCATGTCTACACT
    GAGAGGGGTTGGAGGTGTCTCTGTCACTTCTTTTCCTGCCAGGTGTGATGGTGAAGAGCA
    AACCCGGATCAGCCTGAATTGTACTCAGAAGACTTTGATGCAGGTGCTAGCCTTTCTTTC
    CCAGGACAGACAACTTTATCAGAAAACTGAAATTCTTTCATTGGAGAAGCCTTTGCTTCT
    GCATACTGGAATGGGACGGTTGTGCACACTGGGATAAGCCGAATTCCAGCACACTGGGCG
    GNCGTTACTAGTGGATCCGAGCTCGGTACCAGCTTGATGCATAGCTTGGAGTATCTATAG
    TGTCCCTAAATAGCTNGGGGTAACATGGTCATAGCTGNTTCCTGGGGTGAATTGNTATCC
    GCTCCAATTCCCACAACATACGAGCGGAAGCATAAAGNGGAAANCCGGGGNGCCTAATGA
    GTGAGCTACTCAATTTATTGNGNTGGCNCACNGCCGCTTTCAGTCGGGAAACTGTCNNGC
    NNCTNNTNATGAATCGCCACCCNCGGGGAAGNGGTTGNNATNGGGCCTTCCNCTCCNC
  • Synonyms
    GUDMAP:6060 probe, maprobe:719
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Nif3l1 Ngg1 interacting factor 3-like 1 (S. pombe)
Expression
  • Assay Results
    13
Sequences
AF284439 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/14/2024
MGI 6.23
The Jackson Laboratory