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MTF#711 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#711
  • Sequence Type
    cDNA
  • ID
    MGI:3506388
  • Region Covered
    Nucleotides 273-1105 of GenBank Accession ID AF209854.
  • Vector Type
    Plasmid
  • Insert Size
    0.832kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers GCCTATAGGTGGATCCGCAACC and GATGATGGGCACAGCTGTCTGG. Template sequence provided by Paul Gray:
    GCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTGCCTATAGGTGGATC
    CGCAACCACCTGGAAGAGCACATGGATACCTGCCTGCCAAAGCAGAGCGTCTATGATGCC
    TATCGAAAGTACTGCGAGAGCCTCGCCTGTTGCCGCCCGCTCAGCACAGCCAACTTCGGT
    AAAATCATCAGAGAGATCTTCCCTGACATCAAGGCCCGAAGACTCGGTGGCCGGGGCCAG
    TCCAAATATTGCTACAGTGGCATTCGAAGGAAGACCTTGGTATCCATGCCACCATTGCCT
    GGACTCGACTTGAAGGGATCTGAAAGTCCAGAAATGGGCCCAGAAGTAAGCCCAGCACCT
    CGGGATGAACTGGTAGAAGCAGCCTGTGCCCTGACTTGTGACTGGGCAGAGCGGATCCTG
    AAGCGGTCCTTCAGTTCCATCGTCCAGGTCGCCCGCTACCTCCTGCAGCAGCATCTCATC
    TCTGCCCGGTCGGCACATGCTCATGTGCTTAAGGCCGGGGGGCTTGCTGAAGAGGATGAA
    AGAGCCCCTCGAGAACGGTCATTATGTAAGTCCAAGAATGTCGTAGAAAGCCTGGAAGGG
    GGAGGCCCTAAGAAACCAGAGAGACCGGCCCAGCCTCCTAAAGAGCAAGAAGCCCGAGCT
    GGGACAGACCTTCCAGGGCGTGCAGAACGGAAGAAGAGTGTAATTGACAGCTCGGNTNCC
    AGCAGCCAGTAAGCCACAAGTTAATGCTCTTGGGGCCCGACTGCCTGTGCTGCTTCCNAG
    ANCACCACGATCACTTATCACNCCCATTTCAGGCACTCTGAAAGTAGCTACGCTGNCTCT
    ACCCACTAGGGNTGGANGGCCCCAGANAGCTGTTGCCCATCATCAAGNCGAANTCCAGCC
    AACNTGGGGGNNGTTACTAGTGGATCCGANCCCGGTACCAAACCTTGAGGCANAACCTTG
    AGTATTCTATAGGGGNCCCCAAATAAGCTTNGGG
  • Synonyms
    GUDMAP:5711 probe, GUDMAP:12644 probe, GUDMAP:12645 probe, maprobe:418
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Rfx5 regulatory factor X, 5 (influences HLA class II expression)
Expression
  • Assay Results
    68
Sequences
AF209854 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/28/2024
MGI 6.13 		The Jackson Laboratory