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MTF#686 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#686
  • Sequence Type
    cDNA
  • ID
    MGI:3506369
  • Region Covered
    Nucleotides 621-1402 of GenBank Accession ID X76088.
  • Vector Type
    Plasmid
  • Insert Size
    0.781kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers CTGCAGCTTACCAACATTCAGG and GTAAGACTGGCTGGCATTGC. Template sequence provided by Paul Gray:
    GNTCGAGCGGCCGCAGTGTGATGGATATCTGCAGAATTCGGCTTCTGCAGCTTACCAACA
    TTCAGGTGCCACAGCAGGCTATCCCCACACAGCACCTGGTGGTGCAGAGCCCAGCACCGG
    GCACTAAGAGTGGCCAGGTCTCCCTGACGGTGCACAGTGCCCAGCAGGTGCACTCTGCTC
    CTGAGAGGTCACCAGTGCAGGCCAACAACTCCACCAGCAAGACAGCTGGGACTCCTGCGG
    CCACTGTGCAGCAACTACAGGTCCACAGCGTCCAGCAGAGTGTCCCTGTCACCCAAGAGA
    GGTCAGTAGTCCAGGCCACTCCACAGACCAAAGCTGGCCCGGTGCAGCAGCTGACTGTGC
    AGGGACTGCAGCCAGTTCACGTTGCTCAAGAGGTACAGCAACTCCCTCAGGTGCCTGTCC
    CACACGTGTATTCCAGCCAGGTGCAGTACGTGGAAGGTGGCGATGCCAGCTACACAGCCA
    GCGCCATCCGCTCTAGCACCTACCAGTACCCGGAGACGCCTATCTACACGCAGACGGCAG
    GCACCAGCTACTATGAGGCTTCGGGCACGGCTGCCCAGGTCAGCACGCCGGCTACTTCCC
    AGACGGTGGCCAGCAGCGGCTCAGTGCCCATGTATGTGTCCGGCAGCCCAATTGTCGCCA
    GCTCATCCAGCAGCGAGGCTGGGGNCAGCAACAGCAGTGTGGGTGCAGGGGGCAATGGGG
    GGANGCGGCAGCAGTGGTGGTGGCAGTGGCGGCAGCAGCGGCAGCGGANCANGCACCTAC
    GTGATCCAAGGCGGCTACATGCTANGCAATGCCAGCCAGTCTTACAAGCCGAATTCCAGC
    ACACTGGCGGGCGNTTACTAGTGGATCCGAGCTCGGGTACCAAGCTTGATGCATAGCTTN
    GAGNATTCNTATAGNGNCCCCTAAATAGCNTGGGNGNAATCATGGGCNATAGCTGNTTNC
    CTGNGGGNAAANTGNTTTTCCGCNNCAAANTTCCCNNNAANANACGNAGCCGGGAANCAT
    AAAANGNNAAAACCNNGGGGN
  • Synonyms
    GUDMAP:5692 probe, GUDMAP:7253 probe, maprobe:401
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Rfx1 regulatory factor X, 1 (influences HLA class II expression)
Expression
  • Assay Results
    45
Sequences
X76088 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory