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MTF#658 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#658
  • Sequence Type
    cDNA
  • ID
    MGI:3506350
  • Region Covered
    Nucleotides 321-1080 of GenBank Accession ID AJ002366.
  • Vector Type
    Plasmid
  • Insert Size
    0.759kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers AAGGACCTCCTTCAGCAGCTGC and GCTGAAAGCAGTCTGTATCCC. Paul Gray provided two sequence files for this probe. Sequence 1:
    GGATTTTTTTTTCTTAAATTTTGAAAGCAGCTTAACGTGAATGAAAAGCAGTTCCTGAGT
    AACTGCAGTAAACAGTCTTTAAATACATATACATGTACACATACATATATATTTGCAACT
    TAGCTCATTTTGGTTCTGCCTTGGTTTCCCTCCCCAGAGTTAGGTGAATCCCGTCCCTTC
    CTTCTGTTTCAGTTTTCATGTGCAAGTACAACAGCATCAGCTCTGGGAGTCGGCGGGCGT
    GCTGCAGATGTTTCCCCCGGTGTGAGCATCTGCTTGTCTTCAGCCAGGTTTCCAGAGTGA
    CTGCAGGTAAGTTTTTTTTCAACCCACAAAACCTGTGAGCACCATAAACGCTTCACGTCT
    TCTTCATCAGGCGCCGGGATTGCCACGCGTGGAGCTTGTTGTAGGCTGTCTGCAGCATCT
    CTTCTATGTGACTTACCAGATTTGTGCTTAAATACTGCCTCCGAATCTTTTCTTGGAATG
    GGCAGAGCTTTNGTAACTTGGAACCGTTCCAAATTACTCTTCATTTTCACTACCNTTTTC
    TTCTAGGAATGGTGTATTTAACCANGGAAAAGCAAGACCAAAAATATGCCCGCAAGAANG
    TTCCCCNAACAGGCCACCATANAANNTNTTTCCAATTCNANACCGGAAAATCNGTTTTGG
    GNACCAATCTGGGTTTTACCGGCCTTGNTTNGGGTCCCCTCCCCTGGAAAAAAAACCCTC
    CNCCCNAAGNGGAAAAAGGNCNTNNGGAANNGGGGGNNNAANAAAAGAAANACCTGGNCT
    TGGAAAAAAACCCGGGAATTNACACTTTGGGGGGGGGAAAACNTCCNNTTTTTCTTGGGC
    CAAAAAATTTTGAAAAAANTNAAAANAGGCCCGGANTTNNNNNNANCTGNAAGGNCANAT
    TNNAAAAGANNCNGGGAAAANCGGGNNAANCCTGGAAAANAANGGAATCNTTTCNNNAAA
    AGNGNNGTCCCNAATNNCTTTTAAGNGNCCCCNGAAATTTTCCCTTTAAGNGGGGGAAAN
    AAAACTNGTCCNAAAATCCACCAGCGGNGGGGNGAANNNCNCGNCATTTNGNGGGNGTCCAAAANACGNCAACAAGGGGNGNGGGATANCCTTTNNAGGNATNNA Sequence 2:
    GNTGCTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTAAGGACCTCCTT
    CAGTAGCTGCTGCCCAAGTTCAAGCGGAAAGCTAATAAAGAGCTGGAGGAGAAGAACAGA
    ATGCTCCAAGAAGATCCTGTTTTATTCCAACTCTATAAAGACCTTGTTGTGAGCCAAGTG
    ATCAGTGCTGAGGAATTCTGGGCCAATCGTTTAAATGTGAATGCAACAGATAGTTCTACA
    TCCAGTCACAAGCAGGATGTTGGTATTTCTGCAGCATTTCTGGCTGATGTCCGGCCCCAA
    ACGGATGGCTGTAATGGTCTGAGATATAATTTAACTTCTGATATCATTGAATCTATATTT
    AGGACCTATCCAGCAGTAAAAATGAAATATGCAGAAACTGTACCACACAACATGACAGAA
    AAGGAGTTCTGGACACGCTTTTCCCAGTCCCATTATTTTCACAGGGACCGACTAAATACA
    GGATCGAAGGACCTCTTTGCAGAATGTGCCAAAATAGATGAGAAGGGATTAAAAACAATG
    GTTTCATTAGGAGTGAAAAACCCAATGCTAGATTTGACATCGTTGGAAGATAAGCCATTA
    GACGAGGGCTATGGCATTTCCTCTGTGCCATCTACTTCCAATTCCAAATCCATAAAGGAG
    AATAGTAATGCTGCCATCATCAAANGGTTTAACCCCNCAGGGNCATGGTCNTGGCTGCTG
    GTCTCAGGAAAAACAAGCNNAAATGGACAGAATGGTGAGCCCANCAGCGNGGATGGAATT
    CTGGGGANNCAGACTGCTTTCAGCGAATTCAGCCCCCTGGCGGNCGNTACTAGNGGATCC
    GANCTCGGTACCAAGCTTGATGCATAGCTNGAGTATNCTATANNGCCNCNTAAAANCCTG
    GGNGNAANATGGGCANAGCTGTTTNCNNGGGGGAATTNGTNTCCNCTCCCANTNCCCAAA
    ANANACAACCNGNAAAAANAAGGGNAAAACCNGGGGGGGCCTANAGAGNGAACA
  • Synonyms
    GUDMAP:5668 probe, maprobe:378
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Gtf2h1 general transcription factor II H, polypeptide 1
Expression
  • Assay Results
    44
Sequences
AJ002366 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/21/2024
MGI 6.23
The Jackson Laboratory