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MTF#642 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#642
  • Sequence Type
    cDNA
  • ID
    MGI:3506337
  • Region Covered
    Nucleotides 3001-3622 of GenBank Accession ID U85614.
  • Vector Type
    Plasmid
  • Insert Size
    0.621kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers ACAGGCCACCCTGGCATGATGC and CTGCCAACATCTGTCACACGG. Template sequence provided by Paul Gray:
    GNTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTCTGCCAACATCTGTC
    ACACGGGGACAGGGGAGACACATGGTACTTTTTAAATGACCAGAGCACATCAGTCACCAC
    AGGCTTCCCAATGAGTGTCAACTAAGGACCTGACACAAGAAGTATCAAGGAGTGGAGAGA
    CATGGGGCTTGTGCTTGGGGTTGTGAAAAAAAAAATCCTGCAAGAAAACCAAGGAAGCCG
    AGACACAAGTCCTGCCATCCCCATTCCTGCTTGTGGTGGCTGTGGAGGCTCTTGTATCTT
    CCAGGCTAGGGAGTGGCCGAGGCGGGTGGGCCTGGAGCAGGAGGTGGAGGGACCCCATCT
    GCAGGAGGAGGCGGCTGCTGCTGCTGTGGTGGAGGAGGATACATGCCGTTTGGTGCTGTG
    AGGGGTACCCGGGGTCCTAAGATGTTTCCGGGCATTGGAGGCATACCAGGAGGGGTAGGG
    CCACTCCCAGTAGGGTGAATGTTGGCTGCCACAGCGGGGATCATGCGACCTGGCATGGGC
    TGGCCAGGCATCATGGAGCCAGGGCCTGGTATTTGACCTGGTTGGGGAGGATGGGGTGGC
    GGCATCTGATGGTGCATCAGTGGGTAGGGAGGGGGCTGCTGATGCGGCATCATGCCAGGG
    TGGCCTGTAAGCCGAATTCCAGCACACTGGCGGCCGTTACTAGTGGATCCGAGCTCGGTA
    CCAAGCTTGATGCATAGCTTGAGTATTCTATAGTGTCACCTAAATAGCTTGGGCGTAATC
    ATGGTCATAGCTGTTTCCTGTGTGAAANTTGTTATCCGCTCACAATTCCACACAACATAC
    GAGCCGGAAGCATAAAAGTGTAAAANCNTGGGGGTGCCTAATGAGTGAGCTAAACTCNCA
    TTNANTTGCGTTGCGCCTCANTGNCCCGCTTTTCCAGTCNGGNAAACCTGTCGNGCCNCC
    NNCCNTTANNGAATCGGCCAACCCCCNNGGNAAAAGGCGGTTTGCCNTTTTGGGGNNCTC
    TTCCNCNTNCCNC
  • Synonyms
    GUDMAP:5657 probe, GUDMAP:11831 probe, GUDMAP:11924 probe, maprobe:367
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Smarcc1 SWI/SNF related BAF chromatin remodeling complex subunit C1
Expression
  • Assay Results
    72
Sequences
U85614 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:152838 Fu H, et al., A genome-wide screen for spatially restricted expression patterns identifies transcription factors that regulate glial development. J Neurosci. 2009 Sep 9;29(36):11399-408
J:171421 Vandunk C, et al., Development, maturation, and necessity of transcription factors in the mouse suprachiasmatic nucleus. J Neurosci. 2011 Apr 27;31(17):6457-67
J:190636 Wiese CB, et al., A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Front Neurosci. 2012;6:130
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory