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MTF#622 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#622
  • Sequence Type
    cDNA
  • ID
    MGI:3506324
  • Region Covered
    Nucleotides 261-1010 of GenBank Accession ID BC021489.
  • Vector Type
    Plasmid
  • Insert Site
    XbaI/XhoI
  • Insert Size
    0.622kb
  • Note
    Fragment was generated by PCR with primers TGCTCTAGACTCCATCCCAAGTGACTCCTGG and CCGCTCGAGGCAGAGCAGAGAGCTTGCTGG. Paul Gray provided two sequence files for this probe. Sequence 1:
    GNGGAAACNGAGTAAAATATTACCCCAGACCCAGGTACAACCAGCCACAACCCTGGCACC
    AACTCAGTCATCAAGTGTGAGTCCTGCAGAAGCCCAGCCACAGCCTGCTCAGCCTGCAGC
    ACAACCCCAGCCCCAGCCCCAGCCCCCAGCTCAGCCTGAAGTCCAGACCCAGCCAGCTGT
    CTCGTCCCATGTCCCTTCTGAAACACAGCCCTCCCAAGCACAGACATCTAAACCCCTGGT
    TGCAACACAGTGTCAGCCTCAGAGCAGTGTACAAGGACAGTCTCCTGTTCGAGTCCAGAG
    TCCACCACTGACTCGAATACGTCCATCAACTCCATCCCAAGTGACTCCTGGACAGCAACC
    CCAGGTTCAGACTACAGCTTCACAGCCGATTCCAATTCCGCCCCCCACATCTCTGCAGGC
    ACCTTCCCAAGGCCAGCCACAGTCACAGCCCCAGGTGGTGATGAAGCATAATGCTGTAAT
    AGAACATTTAAAACAGAAAAAGACCATGACTCCAGCTGAAAGAGAAGAAAAAAAAAAATG
    AGCGCGGCCGCAAGCTTATTCCCTTTAGTGAGGGTTAATTTTAGCTTGGCACTGGCCGTC
    GTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCA
    CATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCCAA
    CAGTTGCGCAGCCTGAATGGCGAATGGGACGCGCCCTGTAGCGGCGCATTAAGCGCGGCG
    GGTGTGGTGGTTACGCGCAGCGTGACCGCTACACTTGNCAGGGCCCTAGCGCCCGCTCCT
    TTCGCTTCNTNCCNTCCTTTCTCGCCCGTTCGCCGGCTTTNCCCGTCANGTCTNAATCGG
    GGGCTCCCTTTAGGNTCCAANTAGNGCTTTNCGNNCCNCNACCCCAAAANTTGATTANGGGAGGGNNCCNTNNGGGNCNCCCCCCNGATAAAAG Sequence 2:
    GNTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTTGCTCTAGACTCCAT
    CCCAAGTGACTCCTGGACAGCAACCCCAGGTTCAGACTACAGCTTCACAGCCGATTCCAA
    TTCCGCCCCCCACATCTCTGCAGGCACCTTCCCAAGGCCAGCCACAGTCACAGCCCCAGG
    TGGTGATGAAGCATAATGCTGTAATAGAACATTTAAACAGAAAAGACATGACTCCNGCTG
    AAAGAGAAAAAATCAAGGATGATTGTCTGTANCCGGTGATGAAGTTATTNTGGATANNGA
    GNTNAGGAAGAAAANCGGNGGCCANAAACCAAACNGGANANANTGNGGAAANAAACGGAA
    AAAANAAATGNCCCNAGNTTNTTTTNTGNCNTNNGGGGANCCNAATTCCGCNCCTTGGGG
    GGNGTTTNANTGGGATCCANCCCGGGACNAACNTTGNGGNAAACNGGGGATTTTTTAAGG
    GGCCCCAANAANNTGGGGGAAAAAGGGGNNAANANTTTTCCTNGGGNAAATNTTTTCCCC
    NNCAANTNCCCCCNANATAAAAGNCCGGNAAAANAAANNGGNAAACCCGGGGGGGCCCCN
    TGGGGGGGCNCACCTCCCCTTTTTTTNGGNGNGGGCCCAGGGCCCCCTTTTTTNNGGGGA
    AAANTTNTTGGNGGCCCTGNTTTNTAANNANNNCCNCCCCCCCGGGNAAAGAGGTTTTCC
    AANTTGGGGCCCCTTTCCCTTTNCCGCCCAAANAANCCCGNGNCNCNGGGTTTTTNGGGN
    GGGGANAGGGTTTTCCTNTCCCTAAAGGGNGTAATGGGNTTTTCCNAAAATCGGGGANAN
    CNNGGAAAAAATTGGGACCAAANGNCNCNAAAGGNCNGAACCTNAAAGGCCCGGNTGGNG
    GGNTTTTCCAA
  • Synonyms
    GUDMAP:5642 probe, maprobe:354
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Bptf bromodomain PHD finger transcription factor
Expression
  • Assay Results
    44
Sequences
BC021489 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory