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MTF#563 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#563
  • Sequence Type
    cDNA
  • ID
    MGI:3506279
  • Region Covered
    Nucleotides 181-870 of GenBank Accession ID U51992.
  • Vector Type
    Plasmid
  • Insert Site
    XbaI/XhoI
  • Insert Size
    0.689kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers TGCTCTAGAGATTCCCTGGAAGCATGCAGG and CCGCTCGAGAGCTGATTCAGCAGGTGCTGG. Template sequence provided by Paul Gray:
    GGCCGCCAGTGTGATGGATATCTGCAGAATTCGCCCTTTGCTCTAGAGATTCCCTGGAAG
    CATGCAGGCAAGCAAGACTTCCGAGAGGACCAGGATGCTGCCATATTCAAGGCTTGGGCA
    CTGTTTAAGGAAAAGCACAAAGATGGGGACATAGGACACCCCGCTGTCTGGAAGACTCGC
    CTACGCTGTGCCCTCAACAAGAGTTCCGAATTTGAGGAGGTTCCCGAGAGAGGTCGTATG
    GATGTTGCTGAACCCTACAAAGTATATCGAATACTGCCAGCAGGAACCCTCCCTAACCAA
    CCACGGAACCAGAAATCACCATGCAAGCGAAGTATCAGTTGTGTGTCACCTGAGAGGGAA
    GAAAATATGGAAAATGGGAGGACCAATGGCGTTGTAAACCACTCAGACAGTGGCAGCAAC
    ATAGGCGGTGGTGGCAATGGCAGCAACAGGAGCGACAGCAACAGCAACTGCAACTCTGAG
    CTAGAGGAGGGAGCTGGCACAACTGAGGCCACCATTAGAGAGGACCCAGTGTTCCTGGAG
    CATCAACTTCCTCTGAACTCAGACTACTCGCTGCTGCTCACCTTCATCTATGGTGGCCGA
    GTGGTGGGTAAGACCCAGGTGCACAGCCTAGACTGTCGGCTCGTGGCTGAGCGCTCAGAC
    TCGGAGAGCAGCATGGAGCAGGTGGAGTTTCCCAAACCCGACCCACTGGAGCCTACCCAG
    CACCTGCTGAATCAGCTCTCGAGCGGAANGGCGAATTCCAGCACACTGGNCGGCCGTTTA
    CTAGTGGATCCGAGCTCGGTACCAAGCTTGATGCATAGCTTGAGTATTCTATAGTGTCAC
    CTAAATAGCTNGGCGTAATCATGGTCATAGCTGNTTNCCTGTGTGAAANTGTTATCCGCT
    CACAATTCCCNCAACATACGAGCCGGAAGCATAAAGNGTAAANCCTGGGGGGGCCTAATG
  • Synonyms
    GUDMAP:5594 probe, maprobe:312
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Irf9 interferon regulatory factor 9
Expression
  • Assay Results
    45
Sequences
U51992 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/28/2024
MGI 6.13 		The Jackson Laboratory