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MTF#559 Probe Detail
Nucleotide
Probe/Clone
  • Name
    MTF#559
  • Sequence Type
    cDNA
  • ID
    MGI:3506275
  • Region Covered
    Nucleotides 322-1041 of GenBank Accession ID U73029.
  • Vector Type
    Plasmid
  • Insert Site
    XbaI/XhoI
  • Insert Size
    0.719kb
  • Note
    The source of the material used to create this cDNA probe was different than that used to create the GenBank sequence record. Fragment was generated by PCR with primers TGCTCTAGAGCTGTGGAGACCGGAAAGTACC and CCGCTCGAGCCTGTCCATGACATCCAACAGC. Template sequence provided by Paul Gray:
    GNTCGAGCGGCCGCCAGTGTGATGGATATCTGCAGAATTCGGCTTCCGCTCGAGCCTGTC
    CATGACATCCAACAGCTTGCTGGTGAACAGCTTCTGCTTCTCGTTGGTGATATGCTCTGG
    ACCTGGGAACTTGACCTGCTCCAGGCTGACAGGACCAAAGAGCTCCTCCTGGTCGGGCAT
    GGGGCCCAGGTCCCCATAGAAGAGCCGGCAGCCCTGGGGGTTGCTCACCGTCATAGTTTG
    CCCGTACTCCTTCCCACGATACTGAAATTTGATGTCCAAGTCAGTCATGGGGAGAGAGCT
    GATCCATAGCTCTGGAGAACTGTAGAAGGGTTGAATGGGTGCCTGGGGTACTTCCATCTC
    CAGAGGTTCTGTTTTGGGCCACACTGATTCGGGGCTGCAGTTTCCCACACTGCAGTTGCC
    CACGCTGGCTGGCGCCATGGGAGAACCGTTGATGTTCAGGAAGGGGAAGGTGTCCTGGAT
    GGGGACATGGTGCTGTGACTGCTCAAGTTCATCCTCCTCCTCATCTTCATCCACATCATT
    ATCTTTCTCATCCCAAGGAGCAGACCCTGTGGATCCTGGATTAATGACAGAGCCCTGGGT
    CTGGGGGATGTCACACACTTGATAGATCTTCACAGGATTCATGGGCACTTCCTTGGTGCC
    ATCGTACATCAAGTTGAACTCCCTGCTTTTGTTGAGAGCACAGCGGAGCTGAGCCTTTCA
    TTTAGCTGGGTCANGATCGTCTACCCCNTTCCTGGTACTTTTNCGGTCTCCACAGCTCTA
    GAGCAAAGCCGAATTCCAGCACACTGGCGGCCGNTACTAGNGGNATCCGAGCTCGGTACC
    AAGCTTGATGCATAGCCTTGAGNATTCTATAGNGTCCCCTAAATAGCTTGGCGTAATCAT
    GGGCNAAAGCTGTTTCCTGTGGGAAATTGNTATCCGCTCNNANTNCCCACAAAATACGAN
    CCGGAAACCTAAAGNNTAAANCCTGGGGGGNCCTATGAGNGANCTAAC
  • Synonyms
    GUDMAP:5590 probe, GUDMAP:20679 probe, maprobe:308
Source
  • Species
    mouse, laboratory
  • Strain
    C57BL
  • Age
    embryonic day 13.5
  • Tissue
    brain
Genes
Irf6 interferon regulatory factor 6
Expression
  • Assay Results
    51
Sequences
U73029 (GenBank | EMBL | ENA | DDBJ | MGI Sequence Detail)
References
J:91257 Gray PA, et al., Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis. Science. 2004 Dec 24;306(5705):2255-2257
J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
J:186535 Herriges JC, et al., Genome-scale study of transcription factor expression in the branching mouse lung. Dev Dyn. 2012 Sep;241(9):1432-53
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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03/18/2025
MGI 6.24 		The Jackson Laboratory